Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906165.1_cds_XP_016456368.1_50208
CDS Infomation

[gene=LOC107780360] [db_xref=GeneID:107780360] [protein=3-ketoacyl-CoA synthase 20-like] [protein_id=XP_016456368.1] [location=complement(join(85239..86024,87719..88486))] [gbkey=CDS]
Sequence

ATGGGGGATGAATCAACTGGAAAAGTTTCAATTGAGGCTCAAGAAAGAAGTAGTAATAAC
AAACTTCCTAATTTTCTCCTATCAGTTAAACTCAAATATGTGAAACTTGGCTACCATTAT
TTGATTAGCCATGTTATGTATTTGTGTCTTGTTCCAATTTTAGGTGCTGTTTCTGTTCAT
CTTTCTACACTTACTGTAGAAGAAGTTGTCCAATTATGGAACCAACTCAAATTCAATCTT
GTTACAGTTATTTTATGTTCAGCTCTTATGGTTTTTTTGGCTACACTCTATTTTATGACT
AGGCCAAGAAAAGTGTACCTAGTCGATTTTTCGTGTTACAAACCTAAACCAGATGTTATG
TGTCCTAAGGAATTATTTATGGAAAGATCAAAACAAGCTGGGATTTTTACTGATGAAAAT
TTGGCATTTCAAAAGAAAATATTAGAGAGGTCAGGTTTAGGACAAAAGACATATTTTCCA
GAAGCACTTTTGAAAGTACCACCAAATCCTTGTATGGCTGAGGCAAGAAAAGAAGCTGAA
ATGGTTATGTTTGGTGCAATTGATGAATTGTTGGAAAAAACTGGTGTTAAGGCTAAGGAT
ATTGGGATTCTTGTGGTGAATTGTAGCTTGTTTAATCCAACTCCTTCACTTTCTGCTATG
ATTGTTAATCATTATAAGCTTAGAGGCAATATTATGAGTTATAACCTTGGTGGTATGGGC
TGTAGTGCTGGATTAATTTCAATTGACCTTGCCAAGCAGATGCTACAGGTGCATCCCAAC
TCTTATGCACTAGTAGTCAGTATGGAAAACATAACACTCAATTGGTACTTTGGCAACAAC
AGATCAATGCTTGTTTCAAATTGCATTTTCAGAATGGGTGGTGCTGCAATTTTACTATCA
AATAAATCATCAGATCGTCGTCGTTCAAAATATCAACTCATCCACACAGTACGTACACAC
AAAGGTGCAGATGACAAAAGCTATAGTTGTGTGTTTCAAGAAGAAGATGACAACAAAAAA
ATTGGTGTAGCATTGTCAAAAGACCTAATGGCTGTAGCAGGAGAAGCCTTAAAAACCAAC
ATCACAACTCTCGGGCCAATAGTCCTCCCTATGTCCGAACAACTACTATTTTTCATCACA
TTAGTCGCGAGAAAAGTTTTCAAGATGAAAATTAAACCGTATATACCAGATTTTAAGTTA
GCGTTCGAGCATTTCTGTATTCATGCAGGTGGAAGGGCGGTGTTGGACGAGTTAGAGAAG
AATCTTGAGTTAAGTCAATGGCATATGGAGCCCTCAAGAATGACATTATATAGGTTTGGA
AATACTTCAAGTAGTTCATTGTGGTATGAATCGGCATATACTGAAGCTAAAGGGAGAATT
AAGAAAGGAGATAGAACATGGCAAATTGCATTTGGTTCAGGTTTTAAATGTAACAGTGCT
GTGTGGTGTGCACTTAGGACAATTAATCCTGCTAAGGAGAAGAATCCTTGGATGGATGAG
ATTGATGAATTCCCAGTTCAAGTACCTAGAGTTGTAACAATTAATGATTCCTAA

Peptide Sequence

PEP ID

XP_016456368.1
PEP Infomation

PREDICTED: 3-ketoacyl-CoA synthase 20-like [Nicotiana tabacum]
Sequence

MGDESTGKVSIEAQERSSNNKLPNFLLSVKLKYVKLGYHYLISHVMYLCLVPILGAVSVH
LSTLTVEEVVQLWNQLKFNLVTVILCSALMVFLATLYFMTRPRKVYLVDFSCYKPKPDVM
CPKELFMERSKQAGIFTDENLAFQKKILERSGLGQKTYFPEALLKVPPNPCMAEARKEAE
MVMFGAIDELLEKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNIMSYNLGGMG
CSAGLISIDLAKQMLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCIFRMGGAAILLS
NKSSDRRRSKYQLIHTVRTHKGADDKSYSCVFQEEDDNKKIGVALSKDLMAVAGEALKTN
ITTLGPIVLPMSEQLLFFITLVARKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEK
NLELSQWHMEPSRMTLYRFGNTSSSSLWYESAYTEAKGRIKKGDRTWQIAFGSGFKCNSA
VWCALRTINPAKEKNPWMDEIDEFPVQVPRVVTINDS

Transcript Sequence

Gene sequence data has not been registered.